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Fernández-Breis JT, Maldonado JA, Marcos M, Legaz-García Mdel C, Moner D, Torres-Sospedra J, Esteban-Gil A, Martínez-Salvador B, Robles M. Leveraging electronic healthcare record standards and semantic web technologies for the identification of patient cohorts. J Am Med Inform Assoc. 2013 Dec;20(e2):e288-96. doi: 10.1136/amiajnl-2013-001923. PubMed PMID: 23934950; PubMed Central PMCID: PMC3861938. FI: PMID: 23934950

Miñarro-Gimenez JA, Madrid M, Fernandez-Breis JT. OGO: an ontological approach for integrating knowledge about orthology. BMC Bioinformatics. 2009 Oct 1;10 Suppl 10:S13. doi: 10.1186/1471-2105-10-S10-S13. PubMed PMID: 19796397; PubMed Central PMCID: PMC2755821. FI: 3.428 PMID: 19796397

Martínez-Martínez I, Navarro-Fernández J, García-Carmona F, Takami H, Sánchez-Ferrer A. Characterization and structural modeling of a novel thermostable glycine oxidase from Geobacillus kaustophilus HTA426. Proteins. 2008 Mar;70(4):1429-41. PubMed PMID: 17894345. FI: 3.419 PMID: 17894345

Maldonado JA, Moner D, Boscá D, Fernández-Breis JT, Angulo C, Robles M. LinkEHR-Ed: a multi-reference model archetype editor based on formal semantics. Int J Med Inform. 2009 Aug;78(8):559-70. doi: 10.1016/j.ijmedinf.2009.03.006. Epub 2009 Apr 21. PubMed PMID: 19386540. FI: 3.126 PMID: 19386540

Menárguez-Tortosa M, Fernández-Breis JT. OWL-based reasoning methods for validating archetypes. J Biomed Inform. 2013 Apr;46(2):304-17. doi: 10.1016/j.jbi.2012.11.009. PubMed PMID: 23246613. FI: 1.792 PMID: 23246613

Martínez-Costa C, Menárguez-Tortosa M, Fernández-Breis JT, Maldonado JA. A model-driven approach for representing clinical archetypes for Semantic Web environments. J Biomed Inform. 2009 Feb;42(1):150-64. doi: 10.1016/j.jbi.2008.05.005. Epub 2008 May 23. PubMed PMID: 18590985. FI: 2.432 PMID: 18590985

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García-Sánchez F, Fernández-Breis JT, Valencia-García R, Gómez JM, Martínez-Béjar R. Combining Semantic Web technologies with Multi-Agent Systems for integrated access to biological resources. J Biomed Inform. 2008 Oct;41(5):848-59. doi: 10.1016/j.jbi.2008.05.007. Epub 2008 May 23. PubMed PMID: 18585096. FI: 1.924 PMID: 18585096

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